How to use agentic biology tools
The biology tools cover the laboratory work that an agent can automate: sequencing, cell culture, microscopy, media preparation, biobank, cytometry, immunoassays, bioprocess and the readings from the equipment. They combine according to the case and the sample travels the chain it needs: it enters the biobank, the medium and the culture are prepared, it is sequenced, PCR or electrophoresis is run, it is captured under the microscope and the result is contrasted with the repository; it is the same journey the robot follows when it pipettes and moves plates inside the laboratory, and if something is critical the agent notifies the response team. Each tool can be used with the application’s implementation, with a third party’s or with one of your own, depending on the functionality and the availability of the system you choose.
The tools that the application uses must meet a compatibility schema (API schema) to be able to connect; if they do not meet it, they are not used. The credentials can be yours or a third party’s: when a third party provides them, their use is also subject to that third party’s terms and conditions.
You can use open-source tools, develop your own from your organization’s programming team, or commission the development to connect your laboratory’s equipment with the application. Nothing is tied to a vendor: the same schema serves anyone who meets it.
How the tools work
The agent requests a tool, the tool validates that the schema is compatible and executes it against the equipment or the system you decide. The database can live in your infrastructure or in an external service, and the tool only reads or writes what the permission allows. Every call stays in the account’s usage log, with time, origin and system; if something fails, it returns the error and does not invent a confirmation.
How to use the tools
BIO-T01 Sample sequencing
Use it to load the batch into the sequencer and follow the run. The tool reports the progress, collects the raw results with their quality control and records every delivery.
Features: batch loading · run progress · quality control · raw results.
BIO-T02 Cell culture
Use it to adjust incubators and conditions per batch according to the protocol. The tool applies temperature, gases and times, and leaves the record of every change.
Features: incubators · conditions per batch · protocols · change log.
BIO-T03 Media preparation
Use it to prepare batches of culture medium with their recipe. The tool controls sterilization and distribution, and delivers the batch with its record.
Features: base recipe · sterilization · distribution per plate · batch record.
BIO-T04 Microscopy capture
Use it to take microscope images and organize them by sample and magnification. The tool saves the session’s metadata and delivers the material ready for analysis.
Features: capture per sample · magnifications · metadata · organization.
BIO-T05 Biobank record
Use it to register samples in the biobank with their origin, preservation and location. The tool leaves the traceability of every movement and confirms the registration.
Features: sample registration · preservation · location · traceability.
BIO-T06 PCR results
Use it to read the quantitative PCR runs and their classification per sample. The tool delivers cycles, curves and the result ready for the report.
Features: curves · cycles · classification · results per sample.
BIO-T07 Electrophoresis
Use it to collect the gels and their readings. The tool extracts bands, weights and controls from each run and delivers them to the agent.
Features: gels · bands · weights · controls.
BIO-T08 Colony counting
Use it to count colonies per plate with the camera or the laboratory’s counter. The tool records the result per dilution and keeps the image.
Features: counting per plate · dilutions · record · images.
BIO-T09 Strain record
Use it to keep the strain catalogue with origin, passages and preservation. The tool warns when it is time to renew and delivers the record of each strain.
Features: catalogue · passages · preservation · renewal notices.
BIO-T10 Mass spectrometry
Use it to read the spectrometer’s results per sample. The tool delivers peaks, masses and their interpretation ready for analysis.
Features: peaks · masses · interpretation · results per sample.
BIO-T11 Flow cytometry
Use it to count and classify cells by marker. The tool runs the sample in the cytometer and delivers populations and percentages.
Features: populations · markers · sorting · report.
BIO-T12 Protein expression and purification
Use it to induce the expression and purify the protein of interest. The tool controls the culture, the lysis and the purification, and delivers the yield per batch.
Features: induction · lysis · purification · yield.
BIO-T13 Bioreactor fermentation
Use it to control the bioreactor per batch. The tool adjusts temperature, pH and oxygen, and reports the fermentation’s progress.
Features: temperature · pH · oxygen · progress per batch.
BIO-T14 Immunological assays
Use it to run immunological assays such as ELISA and read their results. The tool applies the plate, measures and delivers the curve per sample.
Features: ELISA · antibodies · curve · results per sample.
BIO-T15 Field sampling
Use it to take biological samples in the field, with their cold chain and record. The tool guides the sampling point and delivers the identified sample to the laboratory.
Features: sampling point · cold chain · identification · transfer.
Start now
You can use these tools on natuleadan.app or on any open platform that connects your systems. If you use the application, create your account and link your credentials so your agent uses them according to the task. Usage details live in pricing.